Get cell metadata
Examples
data(small_example_dataset)
get_colData(small_example_dataset)
#> Mutation_Status Cell_Cycle Treatment sizeFactor gene_snn_res.0.2
#> Cell_001 negative G2M treat1 1.1145726 1
#> Cell_002 negative G0 treat2 1.0258532 1
#> Cell_003 negative G1 treat1 1.0290112 1
#> Cell_004 positive G1 treat1 0.9819388 1
#> Cell_005 positive G0 treat1 1.0348930 1
#> Cell_006 positive G1 treat1 0.9429467 1
#> Cell_007 positive G1 treat1 0.9318988 1
#> Cell_008 positive S treat2 0.9793545 1
#> Cell_009 negative G2M treat2 0.9828149 1
#> Cell_010 positive S treat2 0.8824296 1
#> Cell_011 positive G1 treat2 1.0247074 1
#> Cell_012 negative G1 treat2 0.9509959 1
#> Cell_013 negative G1 treat2 0.9716238 1
#> Cell_014 negative G0 treat2 1.0996512 1
#> Cell_015 positive G1 treat2 0.9799518 1
#> Cell_016 negative G1 treat1 0.9352124 1
#> Cell_017 positive S treat2 1.0002126 1
#> Cell_018 negative G0 treat1 1.0995758 1
#> Cell_019 positive G0 treat1 1.0193572 1
#> Cell_020 negative S treat1 0.9255821 1
#> Cell_021 negative G2M treat1 1.0059541 1
#> Cell_022 positive S treat1 0.9269527 1
#> Cell_023 negative G0 treat2 1.0758021 1
#> Cell_024 positive G1 treat1 0.9763458 1
#> Cell_025 positive G2M treat1 1.0253497 1
#> Cell_026 positive S treat1 0.9814304 1
#> Cell_027 negative G2M treat1 1.0924157 1
#> Cell_028 negative G1 treat1 0.8926685 1
#> Cell_029 positive G0 treat1 0.9606481 1
#> Cell_030 positive G0 treat1 1.0054834 1
#> Cell_031 negative G1 treat1 0.9786144 1
#> Cell_032 negative S treat1 0.9814397 1
#> Cell_033 negative S treat2 1.0179959 1
#> Cell_034 positive S treat2 1.0932561 1
#> Cell_035 positive G0 treat1 1.0014124 1
#> Cell_036 positive G2M treat2 1.0006518 1
#> Cell_037 negative G1 treat1 0.8801498 1
#> Cell_038 negative G0 treat1 1.0819076 1
#> Cell_039 negative S treat1 0.9758182 1
#> Cell_040 negative G1 treat2 0.9448406 1
#> Cell_041 negative G0 treat2 0.9609479 1
#> Cell_042 negative G0 treat2 0.9759914 1
#> Cell_043 negative G0 treat2 0.9689277 1
#> Cell_044 negative S treat2 1.0541597 1
#> Cell_045 positive S treat2 0.9910263 1
#> Cell_046 negative S treat2 0.9539840 1
#> Cell_047 positive S treat2 0.9629895 1
#> Cell_048 positive S treat2 0.9452803 1
#> Cell_049 negative G2M treat2 0.9545133 1
#> Cell_050 positive G0 treat2 0.9663592 1
#> Cell_051 negative S treat2 1.0291404 1
#> Cell_052 negative G2M treat1 0.9446159 1
#> Cell_053 negative G2M treat1 1.0692874 1
#> Cell_054 positive G2M treat1 0.9183253 1
#> Cell_055 positive G1 treat2 0.9951239 1
#> Cell_056 negative G1 treat2 1.0204158 1
#> Cell_057 negative G0 treat1 0.9897214 1
#> Cell_058 positive S treat2 0.9547637 1
#> Cell_059 positive S treat2 0.9913231 1
#> Cell_060 positive G1 treat1 1.0746326 1
#> Cell_061 positive G2M treat2 1.0726131 1
#> Cell_062 negative G2M treat1 0.9961637 1
#> Cell_063 negative S treat2 0.9710829 1
#> Cell_064 positive S treat1 1.0525661 1
#> Cell_065 positive G1 treat2 0.9683463 1
#> Cell_066 positive S treat2 0.9116608 1
#> Cell_067 positive G2M treat2 1.0339690 1
#> Cell_068 positive S treat2 1.0590225 1
#> Cell_069 positive G2M treat1 0.9962803 1
#> Cell_070 negative G1 treat1 1.0685195 1
#> Cell_071 negative S treat2 1.0034075 1
#> Cell_072 negative G0 treat1 0.9347527 1
#> Cell_073 negative G1 treat2 0.9767006 1
#> Cell_074 positive G1 treat1 0.9643088 1
#> Cell_075 negative G2M treat1 1.0429042 1
#> Cell_076 negative G2M treat2 1.0979463 1
#> Cell_077 positive G2M treat2 1.0130950 1
#> Cell_078 positive G1 treat2 0.9634182 1
#> Cell_079 negative G2M treat1 0.9319686 1
#> Cell_080 positive S treat1 1.0402156 1
#> Cell_081 negative G0 treat2 1.0271916 1
#> Cell_082 negative S treat1 1.0317826 1
#> Cell_083 negative G1 treat2 0.9765001 1
#> Cell_084 negative S treat2 1.0043030 1
#> Cell_085 negative G1 treat1 1.0450564 1
#> Cell_086 positive S treat2 1.0952878 1
#> Cell_087 positive G2M treat2 1.0253371 1
#> Cell_088 positive G2M treat2 1.0344026 1
#> Cell_089 positive G1 treat2 1.0036942 1
#> Cell_090 positive G0 treat2 0.9457718 1
#> Cell_091 positive G1 treat2 1.1214554 1
#> Cell_092 positive S treat2 0.9634439 1
#> Cell_093 positive G0 treat1 1.0793421 1
#> Cell_094 positive G2M treat1 1.0587092 1
#> Cell_095 negative S treat1 1.0215250 1
#> Cell_096 positive G2M treat2 1.0400255 1
#> Cell_097 negative G2M treat2 0.9881216 1
#> Cell_098 positive G0 treat2 0.9808671 1
#> Cell_099 positive G0 treat2 1.0298299 1
#> Cell_100 positive G1 treat1 1.0232027 1
#> Cell_101 positive S treat1 0.9786401 1
#> Cell_102 positive G2M treat1 1.1133959 1
#> Cell_103 negative G1 treat2 0.9665361 1
#> Cell_104 positive G1 treat2 1.0344762 1
#> Cell_105 negative S treat1 0.9392695 1
#> Cell_106 positive G1 treat1 1.0007739 1
#> Cell_107 positive G1 treat1 0.9301685 1
#> Cell_108 negative G1 treat2 0.9176411 1
#> Cell_109 negative G0 treat2 0.9928462 1
#> Cell_110 negative G2M treat2 0.9690930 1
#> Cell_111 negative G2M treat2 0.9998078 1
#> Cell_112 positive G2M treat1 0.9886310 1
#> Cell_113 positive G1 treat2 1.1554798 1
#> Cell_114 negative G1 treat1 0.9750654 1
#> Cell_115 negative G2M treat1 0.9928583 1
#> Cell_116 positive G2M treat2 1.0670164 1
#> Cell_117 negative G2M treat1 0.9315175 1
#> Cell_118 negative G1 treat2 0.8990550 1
#> Cell_119 negative G0 treat2 0.9660859 1
#> Cell_120 positive G1 treat1 0.9265683 1
#> Cell_121 negative G0 treat1 0.9869852 1
#> Cell_122 positive G1 treat1 0.9528340 1
#> Cell_123 negative G0 treat1 0.9797962 1
#> Cell_124 negative G1 treat2 1.0580552 1
#> Cell_125 positive G1 treat2 1.0913942 1
#> Cell_126 negative G2M treat2 1.1448574 1
#> Cell_127 negative G0 treat2 1.0742030 1
#> Cell_128 negative S treat2 1.0427186 1
#> Cell_129 negative G2M treat2 1.0160625 1
#> Cell_130 positive G0 treat1 0.8845348 1
#> Cell_131 positive G1 treat1 1.0563213 1
#> Cell_132 positive S treat2 1.0108953 1
#> Cell_133 negative G1 treat1 1.0086093 1
#> Cell_134 negative G2M treat1 0.9637208 1
#> Cell_135 negative S treat2 0.9950524 1
#> Cell_136 negative S treat1 0.9943510 1
#> Cell_137 positive G2M treat2 1.0011909 1
#> Cell_138 positive G0 treat2 0.9439179 1
#> Cell_139 negative G0 treat2 0.9515168 1
#> Cell_140 negative G1 treat2 0.9426286 1
#> Cell_141 positive G2M treat2 0.9336732 1
#> Cell_142 positive G0 treat1 0.9540710 1
#> Cell_143 negative G2M treat2 1.0502945 1
#> Cell_144 negative S treat1 0.9908649 1
#> Cell_145 positive S treat2 0.9641350 1
#> Cell_146 negative G0 treat1 0.9920954 1
#> Cell_147 positive G1 treat2 0.9347253 1
#> Cell_148 positive G0 treat1 1.0563486 1
#> Cell_149 positive G0 treat1 0.9420012 1
#> Cell_150 negative S treat2 0.9897291 1
#> Cell_151 negative G2M treat1 0.9783924 1
#> Cell_152 negative G0 treat2 1.0454217 1
#> Cell_153 positive G0 treat1 1.0868901 1
#> Cell_154 negative G2M treat2 0.9689864 1
#> Cell_155 positive G1 treat1 1.0115313 1
#> Cell_156 positive S treat2 0.9569000 1
#> Cell_157 positive G0 treat2 0.9532079 1
#> Cell_158 negative G1 treat2 0.9287082 1
#> Cell_159 negative G1 treat2 1.0397039 1
#> Cell_160 positive G0 treat1 0.9395819 1
#> Cell_161 positive S treat1 1.0524298 1
#> Cell_162 positive G2M treat2 0.9173944 1
#> Cell_163 negative G2M treat1 1.0188281 1
#> Cell_164 positive G2M treat2 1.0616031 1
#> Cell_165 positive G0 treat1 0.9806334 1
#> Cell_166 negative S treat1 1.0495063 1
#> Cell_167 positive S treat2 1.0266468 1
#> Cell_168 positive G1 treat2 0.9198476 1
#> Cell_169 positive G2M treat2 1.0458789 1
#> Cell_170 positive G0 treat1 1.0182435 1
#> Cell_171 negative G0 treat1 1.1039449 1
#> Cell_172 negative G1 treat2 1.0001994 1
#> Cell_173 negative G1 treat1 0.9096646 1
#> Cell_174 negative G0 treat2 0.9405274 1
#> Cell_175 positive G1 treat2 1.1460040 1
#> Cell_176 positive G0 treat2 1.0153850 1
#> Cell_177 positive G1 treat1 1.0040565 1
#> Cell_178 positive G1 treat1 1.0496552 1
#> Cell_179 negative G2M treat2 1.0046584 1
#> Cell_180 negative S treat1 1.0375506 1
#> Cell_181 positive S treat2 0.9591888 1
#> Cell_182 negative G2M treat2 0.9937740 1
#> Cell_183 negative G1 treat1 1.0922044 1
#> Cell_184 negative G1 treat1 0.9659657 1
#> Cell_185 positive G1 treat2 1.0436392 1
#> Cell_186 positive G1 treat2 1.0234783 1
#> Cell_187 negative S treat1 1.0136519 1
#> Cell_188 negative G0 treat1 0.9763010 1
#> Cell_189 positive S treat2 1.0316742 1
#> Cell_190 negative G1 treat1 0.9619334 1
#> Cell_191 negative G1 treat1 1.0156674 1
#> Cell_192 negative S treat2 1.0761745 1
#> Cell_193 negative S treat2 0.9816982 1
#> Cell_194 positive G2M treat1 0.9848616 1
#> Cell_195 negative G2M treat2 0.9232160 1
#> Cell_196 positive S treat2 0.9821040 1
#> Cell_197 negative G1 treat2 0.9662633 1
#> Cell_198 negative G0 treat1 1.0046841 1
#> Cell_199 positive G1 treat2 0.9722350 1
#> Cell_200 negative G0 treat1 1.0387534 1
#> gene_snn_res.0.4 gene_snn_res.0.6 gene_snn_res.0.8 gene_snn_res.1
#> Cell_001 1 1 1 1
#> Cell_002 1 1 1 2
#> Cell_003 1 1 1 3
#> Cell_004 1 1 1 2
#> Cell_005 1 1 1 4
#> Cell_006 1 1 1 5
#> Cell_007 1 1 1 1
#> Cell_008 1 1 1 1
#> Cell_009 1 1 1 3
#> Cell_010 1 1 1 4
#> Cell_011 1 1 1 4
#> Cell_012 1 1 1 4
#> Cell_013 1 1 1 4
#> Cell_014 1 1 1 1
#> Cell_015 1 1 1 5
#> Cell_016 1 1 1 2
#> Cell_017 1 1 1 2
#> Cell_018 1 1 1 1
#> Cell_019 1 1 1 2
#> Cell_020 1 1 1 5
#> Cell_021 1 1 1 5
#> Cell_022 1 1 1 4
#> Cell_023 1 1 1 3
#> Cell_024 1 1 1 3
#> Cell_025 1 1 1 2
#> Cell_026 1 1 1 2
#> Cell_027 1 1 1 2
#> Cell_028 1 1 1 5
#> Cell_029 1 1 1 2
#> Cell_030 1 1 1 2
#> Cell_031 1 1 1 5
#> Cell_032 1 1 1 5
#> Cell_033 1 1 1 4
#> Cell_034 1 1 1 2
#> Cell_035 1 1 1 2
#> Cell_036 1 1 1 1
#> Cell_037 1 1 1 2
#> Cell_038 1 1 1 4
#> Cell_039 1 1 1 4
#> Cell_040 1 1 1 1
#> Cell_041 1 1 1 3
#> Cell_042 1 1 1 1
#> Cell_043 1 1 1 1
#> Cell_044 1 1 1 2
#> Cell_045 1 1 1 5
#> Cell_046 1 1 1 5
#> Cell_047 1 1 1 3
#> Cell_048 1 1 1 3
#> Cell_049 1 1 1 2
#> Cell_050 1 1 1 1
#> Cell_051 1 1 1 4
#> Cell_052 1 1 1 3
#> Cell_053 1 1 1 1
#> Cell_054 1 1 1 1
#> Cell_055 1 1 1 1
#> Cell_056 1 1 1 1
#> Cell_057 1 1 1 4
#> Cell_058 1 1 1 3
#> Cell_059 1 1 1 2
#> Cell_060 1 1 1 3
#> Cell_061 1 1 1 3
#> Cell_062 1 1 1 4
#> Cell_063 1 1 1 5
#> Cell_064 1 1 1 3
#> Cell_065 1 1 1 2
#> Cell_066 1 1 1 2
#> Cell_067 1 1 1 2
#> Cell_068 1 1 1 1
#> Cell_069 1 1 1 5
#> Cell_070 1 1 1 1
#> Cell_071 1 1 1 2
#> Cell_072 1 1 1 2
#> Cell_073 1 1 1 4
#> Cell_074 1 1 1 5
#> Cell_075 1 1 1 1
#> Cell_076 1 1 1 4
#> Cell_077 1 1 1 1
#> Cell_078 1 1 1 5
#> Cell_079 1 1 1 2
#> Cell_080 1 1 1 5
#> Cell_081 1 1 1 4
#> Cell_082 1 1 1 4
#> Cell_083 1 1 1 4
#> Cell_084 1 1 1 1
#> Cell_085 1 1 1 2
#> Cell_086 1 1 1 4
#> Cell_087 1 1 1 1
#> Cell_088 1 1 1 4
#> Cell_089 1 1 1 2
#> Cell_090 1 1 1 5
#> Cell_091 1 1 1 4
#> Cell_092 1 1 1 2
#> Cell_093 1 1 1 5
#> Cell_094 1 1 1 1
#> Cell_095 1 1 1 2
#> Cell_096 1 1 1 2
#> Cell_097 1 1 1 2
#> Cell_098 1 1 1 2
#> Cell_099 1 1 1 2
#> Cell_100 1 1 1 4
#> Cell_101 1 1 1 5
#> Cell_102 1 1 1 2
#> Cell_103 1 1 1 5
#> Cell_104 1 1 1 3
#> Cell_105 1 1 1 4
#> Cell_106 1 1 1 1
#> Cell_107 1 1 1 1
#> Cell_108 1 1 1 2
#> Cell_109 1 1 1 5
#> Cell_110 1 1 1 1
#> Cell_111 1 1 1 2
#> Cell_112 1 1 1 2
#> Cell_113 1 1 1 5
#> Cell_114 1 1 1 3
#> Cell_115 1 1 1 2
#> Cell_116 1 1 1 5
#> Cell_117 1 1 1 2
#> Cell_118 1 1 1 4
#> Cell_119 1 1 1 2
#> Cell_120 1 1 1 2
#> Cell_121 1 1 1 1
#> Cell_122 1 1 1 1
#> Cell_123 1 1 1 1
#> Cell_124 1 1 1 2
#> Cell_125 1 1 1 2
#> Cell_126 1 1 1 1
#> Cell_127 1 1 1 3
#> Cell_128 1 1 1 2
#> Cell_129 1 1 1 5
#> Cell_130 1 1 1 5
#> Cell_131 1 1 1 4
#> Cell_132 1 1 1 5
#> Cell_133 1 1 1 1
#> Cell_134 1 1 1 3
#> Cell_135 1 1 1 5
#> Cell_136 1 1 1 1
#> Cell_137 1 1 1 2
#> Cell_138 1 1 1 2
#> Cell_139 1 1 1 4
#> Cell_140 1 1 1 4
#> Cell_141 1 1 1 1
#> Cell_142 1 1 1 4
#> Cell_143 1 1 1 5
#> Cell_144 1 1 1 5
#> Cell_145 1 1 1 4
#> Cell_146 1 1 1 1
#> Cell_147 1 1 1 2
#> Cell_148 1 1 1 1
#> Cell_149 1 1 1 2
#> Cell_150 1 1 1 2
#> Cell_151 1 1 1 1
#> Cell_152 1 1 1 2
#> Cell_153 1 1 1 1
#> Cell_154 1 1 1 5
#> Cell_155 1 1 1 5
#> Cell_156 1 1 1 3
#> Cell_157 1 1 1 2
#> Cell_158 1 1 1 4
#> Cell_159 1 1 1 2
#> Cell_160 1 1 1 1
#> Cell_161 1 1 1 1
#> Cell_162 1 1 1 1
#> Cell_163 1 1 1 5
#> Cell_164 1 1 1 1
#> Cell_165 1 1 1 2
#> Cell_166 1 1 1 5
#> Cell_167 1 1 1 5
#> Cell_168 1 1 1 1
#> Cell_169 1 1 1 4
#> Cell_170 1 1 1 5
#> Cell_171 1 1 1 2
#> Cell_172 1 1 1 5
#> Cell_173 1 1 1 1
#> Cell_174 1 1 1 2
#> Cell_175 1 1 1 2
#> Cell_176 1 1 1 4
#> Cell_177 1 1 1 5
#> Cell_178 1 1 1 1
#> Cell_179 1 1 1 3
#> Cell_180 1 1 1 2
#> Cell_181 1 1 1 4
#> Cell_182 1 1 1 5
#> Cell_183 1 1 1 3
#> Cell_184 1 1 1 1
#> Cell_185 1 1 1 4
#> Cell_186 1 1 1 1
#> Cell_187 1 1 1 5
#> Cell_188 1 1 1 2
#> Cell_189 1 1 1 1
#> Cell_190 1 1 1 4
#> Cell_191 1 1 1 2
#> Cell_192 1 1 1 2
#> Cell_193 1 1 1 1
#> Cell_194 1 1 1 2
#> Cell_195 1 1 1 3
#> Cell_196 1 1 1 4
#> Cell_197 1 1 1 2
#> Cell_198 1 1 1 5
#> Cell_199 1 1 1 1
#> Cell_200 1 1 1 1