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Human (Homo sapiens) annotations based on genome assembly GRCH38 from Ensembl.

Usage

grch38

Format

An object of class tbl_df (inherits from tbl, data.frame) with 76062 rows and 9 columns.

Details

Variables:

  • ensgene

  • entrez

  • symbol

  • chr

  • start

  • end

  • strand

  • biotype

  • description

Examples

data("grch38")
head(grch38)
#> # A tibble: 6 × 9
#>   ensgene         entrez symbol chr      start    end strand biotype description
#>   <chr>            <int> <chr>  <chr>    <int>  <int>  <int> <chr>   <chr>      
#> 1 ENSG00000000003   7105 TSPAN6 X       1.01e8 1.01e8     -1 protei… tetraspani…
#> 2 ENSG00000000005  64102 TNMD   X       1.01e8 1.01e8      1 protei… tenomodulin
#> 3 ENSG00000000419   8813 DPM1   20      5.09e7 5.10e7     -1 protei… dolichyl-p…
#> 4 ENSG00000000457  57147 SCYL3  1       1.70e8 1.70e8     -1 protei… SCY1 like …
#> 5 ENSG00000000460  55732 FIRRM  1       1.70e8 1.70e8      1 protei… FIGNL1 int…
#> 6 ENSG00000000938   2268 FGR    1       2.76e7 2.76e7     -1 protei… FGR proto-…