Marker Genes will be stored in object metadata as markers
Usage
stash_marker_features(
object,
group_by,
experiment = "gene",
top_n = 200,
p_val_cutoff = 0.5
)
Arguments
- object
A object
- group_by
A metadata variable to group by
- experiment
An experiment to use
- top_n
Use top n genes, Default 200
- p_val_cutoff
p value cut-off, Default value is "0.5"
Value
a SingleCellExperiment object with marker genes